Information for 17-RGCGKCCGKGSAG (Motif 23)

C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A G T C G T C A A G T C A C T G A C T G G T C A A G T C A C T G G T A C A G C T
p-value:1e-9
log p-value:-2.222e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 26.9bp
Average Position of motif in Background56.0 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-RGCGKCCGKGSAG
CAACGTCCGCGG--
 A C G T C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:RGCGKCCGKGSAG
-GAGSCCGAGC--
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RGCGKCCGKGSAG-----
----GCCGCGCAGTGCGT
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RGCGKCCGKGSAG
-GCGCATGCGCAG
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:RGCGKCCGKGSAG
----TNNGGGCAG
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:RGCGKCCGKGSAG
-GCGCCTGCGCA-
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RGCGKCCGKGSAG
---GGACGTGC--
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:RGCGKCCGKGSAG
GGCGCGCT-----
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RGCGKCCGKGSAG
--CTTCCNGGAA-
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:RGCGKCCGKGSAG
-GGGTACGTGC--
 C T G A A C T G A G T C A C T G A C G T A G T C A G T C C T A G A C G T A C T G A T G C C G T A A C T G
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T