Information for 12-ACTCATAGTTCMT (Motif 15)

C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
Reverse Opposite:
G T C A C A G T C T A G T C G A G T C A A G T C G A C T T G C A C A G T A T C G G C T A T A C G A G C T
p-value:1e-11
log p-value:-2.573e+01
Information Content per bp:1.700
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.8 +/- 31.1bp
Average Position of motif in Background42.3 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTCATAGTTCMT
GVACAGNMTGTYCTB
 A C G T A C G T C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACTCATAGTTCMT
---CAAAGGTCAG
 C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACTCATAGTTCMT
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTCATAGTTCMT
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACTCATAGTTCMT
AGNACAGNCTGTTCTN
 A C G T A C G T A C G T C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTCATAGTTCMT
NAGNACANNNTGTNCT-
 A C G T A C G T A C G T A C G T C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTCATAGTTCMT
GRACAGWMTGTYCTB
 A C G T A C G T C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTCATAGTTCMT---
TCTCAAAGGTCACCTG
 C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACTCATAGTTCMT
GAACADWATGTTCTT
 A C G T A C G T C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTCATAGTTCMT---
TCTCAAAGGTCACGAG
 C T G A A G T C C A G T A T G C G T C A A C G T C T G A A C T G A C G T A G C T A G T C G T C A C A G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G