Information for 10-AAAGAGGACAGTG (Motif 12)

T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G
Reverse Opposite:
G T A C C G T A G T A C C G A T A T C G A G C T A G T C A T G C A C G T A T G C C G A T A C G T A C G T
p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.718
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif180.9
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets49.4 +/- 23.7bp
Average Position of motif in Background51.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAAGAGGACAGTG
--TRAGGTCA---
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAAGAGGACAGTG--
NNNNTGAGCACTGTNNG
 A C G T A C G T T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAGAGGACAGTG-----
-NNNANTGCAGTGCNNTT
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGAGGACAGTG
-CAAAGGTCAG--
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAAGAGGACAGTG
-ATGACGTCAYYN
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAAGAGGACAGTG-
----AAAACAATGG
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AAAGAGGACAGTG
------CACAGN-
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAAGAGGACAGTG
-CCAGGAACAG--
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAAGAGGACAGTG----
---NAGGTCANTGACCT
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAAGAGGACAGTG
--AGRGGTCA---
 T C G A G T C A C G T A A T C G G T C A A T C G T C A G T C G A A T G C C G T A A C T G C G A T C A T G
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T