Information for 5-CCTGWAGGTGRATGAG (Motif 11)

G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T A G C T A G T C C G T A A G T C A G T C A G C T G C A T A G T C C G T A A C T G A C T G
p-value:1e-11
log p-value:-2.750e+01
Information Content per bp:1.816
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 27.2bp
Average Position of motif in Background65.4 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTGWAGGTGRATGAG
-SDGCAGGTGCNS---
 G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTGWAGGTGRATGAG--
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTGWAGGTGRATGAG--
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCTGWAGGTGRATGAG-
--AGAAAGTGAAAGTGA
 G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCTGWAGGTGRATGAG
-------GTGGAT---
 G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCTGWAGGTGRATGAG
--NNCAGGTGNN----
 G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCTGWAGGTGRATGAG
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCTGWAGGTGRATGAG--
-----AGGTGNCAGACAG
 G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCTGWAGGTGRATGAG-
-----AGGTGHCAGACA
 G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCTGWAGGTGRATGAG----
----ACTATGAATGAATGAT
 G T A C A G T C C G A T A C T G C G A T C T G A C T A G A C T G A C G T A C T G T C A G G T C A C G A T A C T G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T