Information for 13-ATAAAACTGC (Motif 25)

C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A T C A G C G A T A C G T A C G T C A G T T C G A C G A T
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.840
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif104.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets48.6 +/- 25.7bp
Average Position of motif in Background45.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ATAAAACTGC----
GAAAAAATTGCAAGG
 A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------ATAAAACTGC
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ATAAAACTGC
CCAATAAAAA---
 A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ATAAAACTGC
NCYAATAAAA----
 A C G T A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATAAAACTGC
GTCATAAAAN---
 A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATAAAACTGC
CCAATAAAAC---
 A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATAAAACTGC
CCAATAAAAA---
 A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATAAAACTGC
GCAATAAAA----
 A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ATAAAACTGC
AAGCCATAAAA----
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATAAAACTGC
GGTAATAAAAA---
 A C G T A C G T A C G T A C G T C G T A A G C T G T C A G T C A C G T A C G T A A G T C C G A T A C T G G T A C
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T