Information for 12-CGAAGATGGC (Motif 23)

A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C C G T A A C G T A G T C A C G T A C G T G T A C T A C G
p-value:1e-7
log p-value:-1.826e+01
Information Content per bp:1.853
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif136.1
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets49.8 +/- 22.9bp
Average Position of motif in Background46.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CGAAGATGGC---
-CAAGATGGCGGC
 A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CGAAGATGGC---
-CAAGATGGCGGC
 A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C A C G T A C G T A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGAAGATGGC
AACAGATGGC
 A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CGAAGATGGC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGAAGATGGC
AACAGATGGT
 A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGAAGATGGC----
---TAATGGCGGNC
 A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGAAGATGGC
NGAAGC----
 A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CGAAGATGGC
NNNNGGGGGAAGANGG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGAAGATGGC--
---GGTTGGCAT
 A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGAAGATGGC
VNAVCAGCTGGC
 A C G T A C G T A T G C C A T G G T C A C G T A A C T G C G T A C G A T A C T G A C T G A T G C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C