Information for 1-CTGGCHGGCCGCAGAC (Motif 2)

A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
Reverse Opposite:
A C T G C A G T A G T C A C G T A C T G A T G C C T A G T A C G T A G C A G T C C T G A A C T G A G T C A G T C C T G A A C T G
p-value:1e-13
log p-value:-3.157e+01
Information Content per bp:1.741
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif28.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets59.4 +/- 21.6bp
Average Position of motif in Background52.0 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGGCHGGCCGCAGAC
CGTGGGTGGTCC-----
 A C G T A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGGCHGGCCGCAGAC
CTGGCAGNCTGCCA--
 A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCHGGCCGCAGAC
NAGANTGGCGGGGNGNA---
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGGCHGGCCGCAGAC
GGTCTGGCAT---------
 A C G T A C G T A C G T A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGGCHGGCCGCAGAC
TTGGCA----------
 A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTGGCHGGCCGCAGAC
---GTGGGCCCCA---
 A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCHGGCCGCAGAC
NTTGGCANN--------
 A C G T A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCHGGCCGCAGAC
GYCTGGYYTNTGTCA---
 A C G T A C G T A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTGGCHGGCCGCAGAC
CAGTGTGGTCGC----
 A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CTGGCHGGCCGCAGAC-
-----RGGGCACTAACY
 A G T C A G C T A C T G A C T G T A G C G A C T A C T G A C T G A T G C A G T C T A C G G T A C C G T A T C A G G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T