p-value: | 1e-8 |
log p-value: | -1.913e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.45% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 51.2 +/- 25.8bp |
Average Position of motif in Background | 58.0 +/- 17.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGACAGTGTA CCAGACAG---- |
|
|
|
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGACAGTGTA---- GHTACAWTGTADCHR |
|
|
|
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGACAGTGTA---- GHWACAWTGTWDCWA |
|
|
|
Sox17/MA0078.1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGACAGTGTA -GACAATGNN |
|
|
|
PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------AGACAGTGTA CAAATCCAGACATCACA |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGACAGTGTA CCAGACRSVB-- |
|
|
|
Myb/MA0100.2/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGACAGTGTA TGGCAGTTGN |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGACAGTGTA BCAGACWA---- |
|
|
|
SOX10/MA0442.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGACAGTGTA ---CTTTGT- |
|
|
|
MEIS1/MA0498.2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGACAGTGTA TTGACAG---- |
|
|
|