Information for 1-AAGCAAAACHCVACCA (Motif 4)

C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G A T A C T G A C T G C A T G A C T G C G A T A C G T A C G T A C G T A T C G G T A C A C G T A G C T
p-value:1e-13
log p-value:-3.048e+01
Information Content per bp:1.816
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 24.6bp
Average Position of motif in Background67.3 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAGCAAAACHCVACCA
--GCAAAACATTACTA
 C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGCAAAACHCVACCA
--GGAAANCCCC----
 C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAGCAAAACHCVACCA
--GGAAATCCCC----
 C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAGCAAAACHCVACCA
----AAATCACAGCA-
 C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAAACHCVACCA
ATATCAAAACAAAACA-
 A C G T C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAGCAAAACHCVACCA----
---ANNTNCCCACCCANNAC
 C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAGCAAAACHCVACCA
--GGAAATTCCC----
 C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAGCAAAACHCVACCA
---CAAATCACTG---
 C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAGCAAAACHCVACCA
CAAAATCGAAACTAA----
 A C G T A C G T A C G T C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAGCAAAACHCVACCA
----AAATCACTGC--
 C T G A C G T A A C T G T A G C C G T A C G T A C G T A C G T A A G T C G T A C A G T C T G A C C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T