Information for 6-GCGGCTTGGA (Motif 15)

T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A
Reverse Opposite:
G A C T T G A C T G A C T G C A T C G A C T A G A T G C A T G C A T C G A T G C
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.650
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.83%
Number of Background Sequences with motif527.2
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets52.9 +/- 26.3bp
Average Position of motif in Background52.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCGGCTTGGA---
---CCTTTGATGT
 T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCGGCTTGGA-
-----TTGGCA
 T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCGGCTTGGA---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCTTGGA
TTGCGGTTT---
 A C G T A C G T T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGGCTTGGA------
-CTGATTGGTCNATTT
 T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCGGCTTGGA---
---CCTTTGAWGT
 T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCGGCTTGGA-----
-TNCCTTTGATCTTN
 T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCGGCTTGGA--------
-CTACTTGGATACGGAAT
 T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCGGCTTGGA-
-CCGATTGGCT
 T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCGGCTTGGA---
-TNCCTTTGATGT
 T A C G T A G C T A C G T A C G G A T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T