Information for 5-GCGGGGTCCA (Motif 12)

A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A
Reverse Opposite:
G C A T A C T G A C T G T G C A G A T C A G T C A G T C T A G C A C T G G T A C
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.759
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif272.4
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets50.7 +/- 28.4bp
Average Position of motif in Background49.3 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTCCA---
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTCCA---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTCCA----
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGGTCCA--
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A C G T A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGGGGTCCA
NRRGGGTCTT
 A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCGGGGTCCA
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGTCCA----
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGGGGTCCA
GGGCGGGACC--
 A C G T A C G T A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGGTCCA
GGGGGCGGGGCC--
 A C G T A C G T A C G T A C G T A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCGGGGTCCA
---AGGTCA-
 A C T G A G T C A T C G A C T G A C T G C T A G A C G T A G T C G T A C C G T A
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T