Information for 4-GTAAGGCCTT (Motif 11)

A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T
Reverse Opposite:
T C G A C T G A T C A G A T C G A G T C G A T C C A G T A G C T G T C A T G A C
p-value:1e-9
log p-value:-2.279e+01
Information Content per bp:1.585
Number of Target Sequences with motif179.0
Percentage of Target Sequences with motif20.18%
Number of Background Sequences with motif5960.9
Percentage of Background Sequences with motif12.58%
Average Position of motif in Targets49.9 +/- 25.8bp
Average Position of motif in Background49.7 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GTAAGGCCTT-
---AGGCCTNG
 A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTAAGGCCTT-
---AGGCCTAG
 A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTAAGGCCTT----
AGAAATGACTTCCCT
 A C G T A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTAAGGCCTT--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTAAGGCCTT------
--CAGGCCNNGGCCNN
 A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTAAGGCCTT---
---TGACCTTGAN
 A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTAAGGCCTT-
-CAAGGHCANV
 A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTAAGGCCTT----
CTTTAAGTACTTAATG
 A C G T A C G T A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTAAGGCCTT
NTAATKGTTT
 A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTAAGGCCTT---
---TGACCTTGAV
 A C T G C A G T T C G A G T C A C T A G T C A G T A G C A G T C G A C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A