Information for 3-CGAAATGGAC (Motif 10)

T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C
Reverse Opposite:
A C T G G A C T A T G C A T G C C G T A A C G T C G A T A C G T A G T C A T C G
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.640
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif223.2
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets57.7 +/- 25.2bp
Average Position of motif in Background49.3 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF7/MA0772.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGAAATGGAC---
ACGAAAGCGAAAGT
 A C G T T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGAAATGGAC--
CAAGATGGCGGC
 T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGAAATGGAC
RACAAWGG--
 T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGAAATGGAC---
TCGAAACCGAAACT
 A C G T T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C A C G T A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGAAATGGAC
AACAAAGG--
 T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGAAATGGAC
NNATAAGGNN
 T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGAAATGGAC-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

IRF9/MA0653.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGAAATGGAC---
AACGAAACCGAAACT
 A C G T A C G T T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C A C G T A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGAAATGGAC---
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGAAATGGAC---
-GAAAMTGAAACT
 T A G C T C A G T G C A G C T A C G T A G C A T T A C G T A C G C T G A T G A C A C G T A C G T A C G T
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T