Information for 3-GCACCTTSCTGAGCCC (Motif 7)

A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C
Reverse Opposite:
A C T G T A C G A C T G A T G C A C G T A G T C C G T A A T C G A T G C C G T A C G T A A C T G A T C G A C G T A T C G A G T C
p-value:1e-11
log p-value:-2.695e+01
Information Content per bp:1.795
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 23.7bp
Average Position of motif in Background47.6 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCACCTTSCTGAGCCC
GGCCYCCTGCTGDGH--
 A C G T A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCACCTTSCTGAGCCC
-CCCCCTGCTGTG---
 A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCACCTTSCTGAGCCC
NNGCACCTTTCTCC----
 A C G T A C G T A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCACCTTSCTGAGCCC
----CCTGCTGAGH--
 A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCACCTTSCTGAGCCC-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GCACCTTSCTGAGCCC-
---------TGACCYCT
 A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCACCTTSCTGAGCCC-----
----TGTCGTGACCCCTTAAT
 A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCACCTTSCTGAGCCC-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCACCTTSCTGAGCCC-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCACCTTSCTGAGCCC
--------ATAATCCC
 A C T G A T G C G T C A A T G C A G T C A C G T C G A T A T C G A T G C A C G T C T A G G T C A A T C G A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C