Information for 2-CCGCGBCGGCGCCAGT (Motif 4)

A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T
Reverse Opposite:
C T G A A G T C A C G T A T C G A C T G A G T C A T C G A T G C G A T C A T C G T A G C A G T C A C T G A G T C A C T G A C T G
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.789
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.5 +/- 25.5bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCGCGBCGGCGCCAGT
CTGCGCATGCGC----
 A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGCGBCGGCGCCAGT
-TGCGCAGGCGC----
 A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCGCGBCGGCGCCAGT
GTGCGCATGCGC----
 A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCGCGBCGGCGCCAGT---
--CCTTCGGCGCCAAAAGG
 A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T A C G T A C G T A C G T
A C G T A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------CCGCGBCGGCGCCAGT
CAACGTCCGCGG----------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CCGCGBCGGCGCCAGT
-GGGGGCGGGGCC---
 A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGBCGGCGCCAGT---
TCAGCACCATGGACAGCTCC
 A C G T A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CCGCGBCGGCGCCAGT---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CCGCGBCGGCGCCAGT---
--AGCTCGGCGCCAAAAGC
 A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T A C G T A C G T A C G T
A C G T A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CCGCGBCGGCGCCAGT
-TGCGTGGGCGT----
 A G T C A G T C A C T G A G T C C T A G A C T G A T G C C T A G A T C G T A G C C T A G A G T C A T G C C G T A A C T G G A C T
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T A C G T