Information for 10-CCTCTAAAGA (Motif 23)

A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C T G
p-value:1e-5
log p-value:-1.284e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets19.0 +/- 8.3bp
Average Position of motif in Background46.4 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0006.1_Bcl6b_1/Jaspar

Match Rank:1
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CCTCTAAAGA
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTCTAAAGA
AGCCACTCAAG-
 A C G T A C G T A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTAAAGA
NSCACTYVAV-
 A C G T A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTCTAAAGA
CCAATAAAAA
 A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTCTAAAGA
RSCACTYRAG-
 A C G T A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTCTAAAGA
CCAATAAAAC
 A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTAAAGA
CCYMATAAAA-
 A C G T A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCTAAAGA
AASCACTCAA--
 A C G T A C G T A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTCTAAAGA-
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTCTAAAGA-
CCTTTTATAGNC
 A C G T A G T C A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C