Information for 8-CCAACTTAAG (Motif 20)

T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G
Reverse Opposite:
A T G C G A C T A C G T C G T A C G T A C T A G G C A T A C G T C T A G A C T G
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.802
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif93.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets50.7 +/- 23.4bp
Average Position of motif in Background48.6 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCAACTTAAG---
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCAACTTAAG
ACCACTTAA-
 T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCAACTTAAG
ACCACTTAA-
 T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCAACTTAAG---
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCAACTTAAG---
TAAGCCACTTAACATT
 A C G T A C G T A C G T T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PB0184.1_Tbp_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAACTTAAG-----
CCGATTTAAGCGACC
 T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAACTTAAG
ACCACTTGAA
 T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCAACTTAAG
GCNGCCATCTTG--
 A C G T A C G T A C G T A C G T T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCAACTTAAG
--CAATTAA-
 T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G
A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCAACTTAAG--
--AACATATGTT
 T G A C A G T C C G T A C G T A A G T C C G A T A C G T T G C A C T G A T A C G A C G T A C G T
A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T