Information for 3-CCGCAGGAAC (Motif 12)

A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C
Reverse Opposite:
A C T G G C A T C G A T A T G C A G T C C A G T C T A G A T G C C T A G T A C G
p-value:1e-10
log p-value:-2.390e+01
Information Content per bp:1.681
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif7.65%
Number of Background Sequences with motif1465.7
Percentage of Background Sequences with motif3.09%
Average Position of motif in Targets48.9 +/- 29.2bp
Average Position of motif in Background50.7 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCGCAGGAAC---
-NDCAGGAARTNN
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T A C G T A C G T
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCGCAGGAAC--
--ACAGGAAGTG
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T A C G T
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCGCAGGAAC-
-NACAGGAAAT
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCGCAGGAAC-
-NACAGGAAAT
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGCAGGAAC--
--CCAGGAACAG
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T A C G T
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCGCAGGAAC--
SCCTAGCAACAG
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCGCAGGAAC--
--DCCGGAARYN
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T A C G T
A C G T A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCGCAGGAAC--
--RCCGGAAGTD
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T A C G T
A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGCAGGAAC-
-GGCGGGAARN
 A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGCAGGAAC---
TACCATAGCAACGGT
 A C G T A C G T A T G C G A T C T A C G G A T C G T C A A C T G T A C G G C T A C G T A T G A C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T