Information for 1-ACTGCAAAGCCCC (Motif 1)

C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
T A C G T A C G A C T G C T A G G T A C C G A T A G C T A C G T A C T G T A G C C T G A A C T G A C G T
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.829
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.3 +/- 10.0bp
Average Position of motif in Background16.3 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACTGCAAAGCCCC
ACTACAATTCCC-
 C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACTGCAAAGCCCC
AAACCGCAAA-----
 A C G T A C G T C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACTGCAAAGCCCC
AAACCGCAA------
 A C G T A C G T C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACTGCAAAGCCCC
ACWTCAAAGG---
 C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACTGCAAAGCCCC
---GGAAANCCCC
 C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAAAGCCCC
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACTGCAAAGCCCC
ACATCAAAGG---
 C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACTGCAAAGCCCC
---GGAAATCCCC
 C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACTGCAAAGCCCC
---GGAAATTCCC
 C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTGCAAAGCCCC-
--GGGAAATCCCCN
 C G T A A G T C A G C T A C T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T