Information for 4-CAGCTGCCTCCCCSCA (Motif 18)

A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
Reverse Opposite:
C G A T A C T G T A G C A T C G C T A G C T A G C T A G G C T A C T A G A T C G A T G C C G T A A C T G A T G C A G C T A C T G
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.746
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.0 +/- 25.8bp
Average Position of motif in Background58.2 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCTCCCCSCA
TGCAGCTGTCCCT-----
 A C G T A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCTCCCCSCA
AGCAGCTGCTNN------
 A C G T A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCCTCCCCSCA
NNACAGCTGC---------
 A C G T A C G T A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGCCTCCCCSCA
HCAGCTGDTN-------
 A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGCCTCCCCSCA
NCAGCTGCTG-------
 A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGCCTCCCCSCA
NVCAGCTGBBNN------
 A C G T A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCCTCCCCSCA
NNGCAGCTGTC--------
 A C G T A C G T A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCTCCCCSCA
AGCAGCTGCT--------
 A C G T A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCTCCCCSCA
AACAGCTGCAG-------
 A C G T A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCTCCCCSCA
AACAGCTG----------
 A C G T A C G T A G T C C T G A A T C G A G T C A C G T A T C G T A G C A G T C C G A T A G T C A G T C G A T C A T G C A T C G A G T C C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T