Information for 5-AARGGAGGAGCTGGCC (Motif 7)

C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C
Reverse Opposite:
C T A G T C A G G A T C A G T C C G T A C T A G T G A C G A C T G A T C A G T C C A G T A T G C G T A C G A C T C G A T A G C T
p-value:1e-10
log p-value:-2.338e+01
Information Content per bp:1.672
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif59.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets52.1 +/- 24.5bp
Average Position of motif in Background49.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AARGGAGGAGCTGGCC
-AAGGKGRCGCAGGCA
 C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AARGGAGGAGCTGGCC
AGGGGGCGGGGCTG---
 A C G T C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AARGGAGGAGCTGGCC-
-GCGGAGGTGTCGCCTC
 C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AARGGAGGAGCTGGCC--
-NNNNAGCAGCTGCTGAN
 C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AARGGAGGAGCTGGCC--
---------NTTGGCANN
 C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.54
Offset:10
Orientation:forward strand
Alignment:AARGGAGGAGCTGGCC
----------TTGGCA
 C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AARGGAGGAGCTGGCC
---ACAGGATGTGGT-
 C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C
A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AARGGAGGAGCTGGCC
---NNAGCAGCTGCT-
 C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C
A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AARGGAGGAGCTGGCC
-GGGGNGGGGC-----
 C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AARGGAGGAGCTGGCC
NNVDGGGYGGGGCYN---
 A C G T A C G T C T G A C G T A C T G A A C T G A T C G G C T A C T A G C T A G C G T A A C T G G A T C C G A T A C T G C T A G A G T C A G T C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T