Information for 4-TGCTGTCCCTCATTTG (Motif 5)

C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
Reverse Opposite:
A G T C G T C A T C G A G C T A C A G T C T A G G T C A A C T G A C T G T A C G C T G A A G T C C G T A A C T G G T A C C G T A
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.674
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.5 +/- 26.6bp
Average Position of motif in Background54.2 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCTGTCCCTCATTTG
-NCTGTCAATCAN---
 C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCTGTCCCTCATTTG
-SCTGTCAVTCAV---
 C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCTGTCCCTCATTTG
GSCTGTCACTCA----
 C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGTCCCTCATTTG-
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCTGTCCCTCATTTG
GTCWGCTGTYYCTCT----
 A C G T A C G T A C G T C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T A C G T A C G T A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:6
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGCTGTCCCTCATTTG--
--------NTCACGTGAT
 C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TGCTGTCCCTCATTTG
AATTTGCTGAC---------
 A C G T A C G T A C G T A C G T C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TGCTGTCCCTCATTTG
TGCTGACTCA------
 C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGCTGTCCCTCATTTG
-GCTGTG---------
 C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGTCCCTCATTTG
GYCTGGYYTNTGTCA----
 A C G T A C G T A C G T C G A T A C T G G T A C C G A T C T A G G A C T A T G C A G T C T G A C A C G T A G T C G T C A C A G T A C G T A C G T C T A G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T A C G T