Information for 3-TAYCTTACARGGAGGC (Motif 4)

A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C
Reverse Opposite:
C A T G A G T C G T A C A C G T A G T C A G T C A G C T A C G T A C T G C G A T G C T A C G T A A C T G C T G A C G A T C T G A
p-value:1e-12
log p-value:-2.821e+01
Information Content per bp:1.759
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.8 +/- 26.2bp
Average Position of motif in Background66.1 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TAYCTTACARGGAGGC
------ACAAAG----
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TAYCTTACARGGAGGC
TNCCATATATGGNA--
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TAYCTTACARGGAGGC--
------ACAAAGGNBCCT
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TAYCTTACARGGAGGC
-----AACAGGAAGT-
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TAYCTTACARGGAGGC
---VRRACAAWGG---
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TAYCTTACARGGAGGC
TNCCATATATGG----
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TAYCTTACARGGAGGC
------ACAGGAAGTG
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TAYCTTACARGGAGGC
ATTTGCATACAATGG---
 A C G T A C G T A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:TAYCTTACARGGAGGC---
---------GGGAGGACNG
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:TAYCTTACARGGAGGC----
----CTACTAGGATGTNNTN
 A G C T C G T A G A C T A G T C G C A T C G A T C G T A A G T C C G T A C T G A C T A G C T A G C G T A A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C