Information for 5-ACTAACACAT (Motif 22)

C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A C G T A C G T C G T A A C T G A C G T
p-value:1e-5
log p-value:-1.261e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 12.7bp
Average Position of motif in Background50.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACTAACACAT--
AAAAATAACAAACGG
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

TBX4/MA0806.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ACTAACACAT
--TCACACCT
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACTAACACAT
ATTAACACCT
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACTAACACAT
--TCACACCT
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACTAACACAT-
-TTMACACCTT
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACTAACACAT
KTTCACACCT
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTAACACAT
--TCACACCT
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTAACACAT
--TGACACCT
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTAACACAT
--TCACACCT
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACTAACACAT-
TTTCACACCTN
 C G T A A G T C A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T