Information for 9-TCACGCSTGACGT (Motif 19)

A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
Reverse Opposite:
T G C A A T G C C T A G C G A T A G T C C G T A T A G C A T C G A T G C A C T G A C G T A C T G G T C A
p-value:1e-7
log p-value:-1.811e+01
Information Content per bp:1.725
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif95.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets58.1 +/- 24.2bp
Average Position of motif in Background50.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX1/MA0779.1/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGCSTGACGT
NGCANTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

PAX9/MA0781.1/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGCSTGACGT
TGCAGTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

Pax6/MA0069.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCACGCSTGACGT
TTCACGCATGAGTT
 A C G T A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TCACGCSTGACGT
-------TGACGT
 A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCACGCSTGACGT
TCACACCT-----
 A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCACGCSTGACGT
TCACACCT-----
 A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCACGCSTGACGT
----NCGTGACN-
 A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCACGCSTGACGT
TCACACCT-----
 A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCACGCSTGACGT
-CACGCA------
 A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCACGCSTGACGT
--NCACGTGACN-
 A C G T A G T C G T C A A G T C A T C G A T G C A T C G A C G T T A C G C G T A A G T C A T C G A C G T
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T