Information for 6-MRCASHCTGGCCA (Motif 14)

T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A
Reverse Opposite:
C A G T A C T G A T C G A G T C A G T C T G C A T A C G C G T A A T C G A C G T A C T G A G C T A C G T
p-value:1e-9
log p-value:-2.167e+01
Information Content per bp:1.685
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif168.1
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets48.2 +/- 25.7bp
Average Position of motif in Background51.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:MRCASHCTGGCCA--
------CGTGCCAAG
 T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:MRCASHCTGGCCA-
--------TGCCAA
 T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---MRCASHCTGGCCA
AGCAACAGCCGCACC-
 A C G T A C G T A C G T T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--MRCASHCTGGCCA-----
TCAGCACCATGGACAGCTCC
 A C G T A C G T T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---MRCASHCTGGCCA-----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-MRCASHCTGGCCA-
TCCCAGMCRAGCCCC
 A C G T T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---MRCASHCTGGCCA
NAGAACAGNCTGTNCT
 A C G T A C G T A C G T T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:MRCASHCTGGCCA----
-----ACTAGCCAATCA
 T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:MRCASHCTGGCCA
---WDNCTGGGCA
 T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:MRCASHCTGGCCA--
-------AGGCCTAG
 T G C A T C G A G T A C C G T A T A G C G A C T A T G C A C G T C T A G A C T G A T G C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G