Information for 5-GYAGCTTTGGTTC (Motif 13)

A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C
Reverse Opposite:
C T A G G T C A G T C A T A G C G T A C C G T A T C G A C G T A C T A G T G A C A C G T C T G A A G T C
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.714
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif66.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets50.0 +/- 27.0bp
Average Position of motif in Background50.3 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GYAGCTTTGGTTC
CCTTGCAATTTTTNN--
 A C G T A C G T A C G T A C G T A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GYAGCTTTGGTTC
---GCTGTGGTTT
 A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GYAGCTTTGGTTC-
--NNHTGTGGTTWN
 A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GYAGCTTTGGTTC
NNGCAGCTGTT----
 A C G T A C G T A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GYAGCTTTGGTTC
---NNTGTGGTTT
 A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GYAGCTTTGGTTC
CGCAGCTGCG----
 A C G T A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GYAGCTTTGGTTC-
----CCTTTGTTTT
 A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GYAGCTTTGGTTC-
----CTGTGGTTTN
 A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GYAGCTTTGGTTC
NNGCAGCTGTC----
 A C G T A C G T A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GYAGCTTTGGTTC
-CAGCTGTT----
 A C T G A G C T C G T A A C T G G A T C A C G T A G C T C G A T A C T G A T C G A C G T A C G T A G T C
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T