Information for 14-WWKAAAATVAMATTGG (Motif 28)

C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
Reverse Opposite:
G T A C G T A C G T C A C G T A A G C T A C T G C A G T A C G T G C T A C G A T C A G T A C G T A C G T G T A C G C A T C G A T
p-value:1e-5
log p-value:-1.248e+01
Information Content per bp:1.635
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif291.2
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets46.5 +/- 29.3bp
Average Position of motif in Background46.5 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--WWKAAAATVAMATTGG
GTTAAAAAAAAAAATTA-
 A C G T A C G T C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WWKAAAATVAMATTGG
-AACAAACAACAAGAG
 C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----WWKAAAATVAMATTGG
CTACCAATAAAATTCT-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:WWKAAAATVAMATTGG-
--AACAATAACATTGTT
 C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G A C G T
A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----WWKAAAATVAMATTGG
AATGCAATAAAATTTAT----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:WWKAAAATVAMATTGG
---AAACAAACATTC-
 C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---WWKAAAATVAMATTGG
NCYAATAAAA---------
 A C G T A C G T A C G T C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--WWKAAAATVAMATTGG
ATATGCAAATNNN-----
 A C G T A C G T C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--WWKAAAATVAMATTGG
CCAATAAAAA--------
 A C G T A C G T C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----WWKAAAATVAMATTGG
AACCCAATAAAATTCG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C A T G T G C A G T C A G T C A C G T A C G A T T G C A G T C A T G A C T C G A C G A T A C G T A C T G C A T G
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T A C G T A C G T A C G T