Information for 4-GCACACGTGT (Motif 26)

C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T
Reverse Opposite:
C G T A A G T C C T G A A G T C T C A G A G C T A C T G A C G T A C T G G T A C
p-value:1e-6
log p-value:-1.515e+01
Information Content per bp:1.857
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif62.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.6 +/- 26.8bp
Average Position of motif in Background47.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GCACACGTGT-
-AACACGTGTT
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T A C G T
A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:GCACACGTGT-
---CACGTGBN
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GCACACGTGT-
-NACACGTGCN
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T A C G T
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:GCACACGTGT-
---CACGTGDC
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:5
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GCACACGTGT
--ACACGTGC
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T
A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:GCACACGTGT-
---CACGTGNC
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

Arnt/MA0004.1/Jaspar

Match Rank:7
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:GCACACGTGT
---CACGTG-
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T

MAX/MA0058.3/Jaspar

Match Rank:8
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCACACGTGT-
-ACCACGTGCT
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T A C G T
A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCACACGTGT-
NNACCACGTGGT
 A C G T C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T A C G T
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCACACGTGT-
-GACACGTGCC
 C A T G G T A C C G T A A G T C C T G A A G T C C T A G A G C T A C T G A C G T A C G T
A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C