Information for 8-CMCTGKGGTAKKAAAY (Motif 17)

A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T
Reverse Opposite:
T C A G A C G T A C G T A C G T G T A C G T A C A C G T C T G A A G T C A G T C G T C A A G T C C G T A A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.861
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 10.9bp
Average Position of motif in Background79.0 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CMCTGKGGTAKKAAAY
NNHTGTGGTTWN----
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CMCTGKGGTAKKAAAY
--CTGTGGTTTN----
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CMCTGKGGTAKKAAAY
-GCTGTGGTTT-----
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CMCTGKGGTAKKAAAY
GTCTGTGGTTT-----
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CMCTGKGGTAKKAAAY---
---TAAGGTAATAAAATTA
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0067.1_Hoxc12/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CMCTGKGGTAKKAAAY----
---TTAGGTCGTAAAATTTC
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CMCTGKGGTAKKAAAY
-NNTGTGGTTT-----
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CMCTGKGGTAKKAAAY
GTCCCCAGGGGA-------
 A C G T A C G T A C G T A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CMCTGKGGTAKKAAAY--
-AATAGGGTATCATATAT
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T A C G T A C G T
A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CMCTGKGGTAKKAAAY---
---AAAGGTAATAAAATTT
 A G T C G T C A A G T C C G A T A C T G A C G T A C T G A C T G A G C T C G T A A C T G C A T G C G T A C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T