Information for 2-ACCATWATTC (Motif 7)

C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C
Reverse Opposite:
A T C G C G T A C T G A A G C T G C T A G C T A C A G T C A T G A C T G G A C T
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.710
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.27%
Number of Background Sequences with motif257.8
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets48.6 +/- 23.4bp
Average Position of motif in Background52.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ACCATWATTC
-CCATTGTTC
 C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACCATWATTC
NCCATTGTTC
 C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0070.1_Sox30_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACCATWATTC---
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACCATWATTC-
-CCATTGTTYB
 C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACCATWATTC
NCCATTGTTY
 C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACCATWATTC
--AATTATT-
 C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACCATWATTC-
GGCCATAAATCA
 A C G T C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C A C G T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACCATWATTC
-CCTTTGTT-
 C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACCATWATTC-
GCCATAAATCA
 C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C A C G T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACCATWATTC-----
TTCAATTGTTCTAAAA
 A C G T C T G A A G T C G T A C G T C A C G A T C G A T C T G A A G C T C G A T A T G C A C G T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A