Information for 1-ARCWGAAATGWCTATT (Motif 2)

C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
Reverse Opposite:
G T C A G C T A A C G T C G T A T A C G C G A T A T G C C G T A A C G T C G A T A C G T A G T C C G T A A C T G A G T C C G A T
p-value:1e-14
log p-value:-3.270e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 18.9bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ARCWGAAATGWCTATT
NNNCTGATATCTCNNNN
 A C G T C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ARCWGAAATGWCTATT-
-------ATGAATATTC
 C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ARCWGAAATGWCTATT
--AAAAAATCGATAAT
 C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ARCWGAAATGWCTATT
--CACTAATT------
 C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ARCWGAAATGWCTATT
--AAAAAATCAATAAT
 C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ARCWGAAATGWCTATT
AAGGCGAAATCATCGCA
 A C G T C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ARCWGAAATGWCTATT
--AAAAAATCGATAAT
 C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

ETV2/MA0762.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ARCWGAAATGWCTATT
AACCGGAAATA------
 A C G T C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ARCWGAAATGWCTATT
-CCWGGAATGY-----
 C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ARCWGAAATGWCTATT
-ACTGAAACCA-----
 C G T A C T A G G T A C C G A T A C T G C G T A C G T A C G T A A C G T T A C G C G T A A G T C A C G T C G T A C A G T C A G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T