Information for 9-TGACTGMAAGYACACA (Motif 19)

C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
Reverse Opposite:
C G A T A C T G C A G T T A C G A G C T C T G A G A T C C G A T C G A T A C T G G T A C C G T A A C T G A G C T A G T C C G T A
p-value:1e-7
log p-value:-1.735e+01
Information Content per bp:1.650
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif50.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.2 +/- 28.3bp
Average Position of motif in Background49.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGACTGMAAGYACACA
TTGACAGC---------
 A C G T C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGMAAGYACACA
BTGABTGACAGS-----
 A C G T C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGACTGMAAGYACACA
TWGTCTGV---------
 A C G T C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGMAAGYACACA
NTGATTGACAGN-----
 A C G T C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGACTGMAAGYACACA----
NNCCTGNAAAAAAAAAAAAA
 C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGACTGMAAGYACACA
--ACAGGAAGTG----
 C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGACTGMAAGYACACA----
NNCCTGNAAAAAAAAAAAAA
 C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGACTGMAAGYACACA
TGAGTGACAGSC----
 C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGACTGMAAGYACACA
GTATTGACAGCTNNTT----
 A C G T A C G T A C G T A C G T C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGACTGMAAGYACACA
TTGACAGG---------
 A C G T C G A T C T A G T C G A A G T C C G A T A C T G T G A C C G T A C G T A C T A G A G C T T C G A A T G C G T C A T G A C C G T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T