p-value: | 1e-8 |
log p-value: | -1.960e+01 |
Information Content per bp: | 1.741 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.93% |
Number of Background Sequences with motif | 9.4 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 43.8 +/- 24.6bp |
Average Position of motif in Background | 49.9 +/- 29.4bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
POL004.1_CCAAT-box/Jaspar
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGKTGGYTGGCAAAAA ---TGATTGGCTANN- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TGKTGGYTGGCAAAAA -----CTTGGCAA--- |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGKTGGYTGGCAAAAA KGTTGCTAGGMAACA- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TGKTGGYTGGCAAAAA -----NTTGGCANN-- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TGKTGGYTGGCAAAAA ------TTGGCA---- |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGKTGGYTGGCAAAAA NGTAGGTTGGCATNNN |
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E2F7/MA0758.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGKTGGYTGGCAAAAA TTTTGGCGGGAAAA-- |
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NFYA/MA0060.2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGKTGGYTGGCAAAAA AGAGTGCTGATTGGTCCA-- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TGKTGGYTGGCAAAAA ----GGTTGGCAT--- |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGKTGGYTGGCAAAAA --BTGABTGACAGS-- |
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