Information for 5-GTCTATATGG (Motif 15)

A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G A T C T G A A C G T C G T A C T A G C G T A G T A C
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.865
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif37.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets51.8 +/- 32.2bp
Average Position of motif in Background49.1 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATATGG
TGTCTAGACG-
 A C G T A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTCTATATGG---
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCTATATGG
GNCTATAAAAGG
 A C G T A C G T A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCTATATGG
NTGTTTAYATWW
 A C G T A C G T A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCTATATGG-----
GTATAAAAGGCGGGG
 A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCTATATGG-----
GTATAAAAGGCGGGG
 A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCTATATGG-
-ACCATATGGT
 A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G A C G T
A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCTATATGG--
--NNATAAGGNN
 A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G A C G T A C G T
A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCTATATGG
CCATATATGG
 A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTCTATATGG
CBTGTTTAYAWW-
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A G A C T C G T A C G A T C T A G A C T G
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T