Information for 4-CTCACTGACC (Motif 12)

A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C
Reverse Opposite:
A T C G A T C G A G C T A G T C C G T A A C T G C G A T C T A G C G T A C T A G
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.832
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif80.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets35.5 +/- 26.2bp
Average Position of motif in Background53.5 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------CTCACTGACC---
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTCACTGACC---
TGACCCAGTGACCTAC
 A C G T A C G T A C G T A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTCACTGACC-
NAGGTCANTGACCT
 A C G T A C G T A C G T A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CTCACTGACC-
-----TGACCT
 A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTCACTGACC---
-----TGACCYCT
 A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTCACTGACC-
AGGNCANNGTGACCT
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTCACTGACC---
-----TGACCTYA
 A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTCACTGACC-
TGAACCCGATGACCC
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTCACTGACC-----
-----TGACCTTGAT
 A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCACTGACC-------
-NNNNTGACCCGGCGCG
 A G T C C G A T A G T C G C T A T G A C A C G T C T A G T C G A A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G