Information for 23-TGGCKGCCAGTTT (Motif 25)

C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T
Reverse Opposite:
T C G A T C G A C T G A T G A C C G A T A C T G T A C G T A G C T G C A C A T G G A T C A T G C C G T A
p-value:1e-6
log p-value:-1.472e+01
Information Content per bp:1.598
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif750.7
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets44.2 +/- 25.6bp
Average Position of motif in Background49.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGGCKGCCAGTTT-
--GCNGCCATCTTG
 C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCKGCCAGTTT
TGTCTGDCACCT-
 C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGCKGCCAGTTT
CTGTCTGTCACCT-
 A C G T C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGGCKGCCAGTTT-
--GCCGCCATCTTG
 C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCKGCCAGTTT
TTGGCA--------
 A C G T C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGCKGCCAGTTT
NTTGGCANN------
 A C G T A C G T C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGGCKGCCAGTTT-
----TGGCAGTTGN
 C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGCKGCCAGTTT
CTGGCAGNCTGCCA
 A C G T C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGGCKGCCAGTTT--
VCAKCTGGNNNCCAGMTGBN
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGCKGCCAGTTT
CWGGCGGGAA----
 A C G T C G A T A T C G C T A G G T A C A C G T A T C G A T G C T G A C C G T A A C T G G A C T A G C T A G C T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T