Information for 10-TTTGCCTAAGTCA (Motif 11)

A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
Reverse Opposite:
A G C T A C T G C G T A A G T C A C G T C G A T C G T A A C T G C T A G A G T C G T C A C G T A G T C A
p-value:1e-12
log p-value:-2.985e+01
Information Content per bp:1.797
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.2 +/- 22.4bp
Average Position of motif in Background46.8 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCTAAGTCA
ATTTGCATAA----
 A C G T A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCCTAAGTCA
AATTTGCATANT---
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCCTAAGTCA
ATTTGCATA-----
 A C G T A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCCTAAGTCA
TAATTTGCATAA----
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCCTAAGTCA
ATTTGCATAT----
 A C G T A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCCTAAGTCA
ATTTGCATA-----
 A C G T A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCCTAAGTCA
TAATTTGCATAA----
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTTGCCTAAGTCA
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TTTGCCTAAGTCA-
-----AAAAGTCAA
 A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTTGCCTAAGTCA
ATTGCATAA----
 A C G T A C G T A C G T T C A G A G T C A G T C A C G T G C T A G T C A A C T G A C G T G T A C C T G A
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T