Information for 4-TDGADTGAAAGAG (Motif 5)

A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G C T A G C T A C G T A T G C C G T A G A T C A C G T A G T C G T C A G T C A
p-value:1e-12
log p-value:-2.913e+01
Information Content per bp:1.851
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.9 +/- 23.6bp
Average Position of motif in Background53.9 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TDGADTGAAAGAG
NTGATTGACAGN-
 A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TDGADTGAAAGAG
BTGABTGACAGS-
 A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TDGADTGAAAGAG
-TGAGTGACAGSC
 A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TDGADTGAAAGAG
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TDGADTGAAAGAG-
AGAAAGTGAAAGTGA
 A C G T A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TDGADTGAAAGAG
GAAAGTGAAAGT-
 A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TDGADTGAAAGAG
TTTGATTGATGN--
 A C G T A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TDGADTGAAAGAG
NANTTCATTGAATTA-
 A C G T A C G T A C G T A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TDGADTGAAAGAG
-TGAGTCA-----
 A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TDGADTGAAAGAG
TTGATTGN-----
 A C G T C A G T A C T G C G T A C A T G A C G T A T C G C G T A C T G A C T G A A C T G C G T A A C T G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T