Information for 21-TCCCTYCCRA (Motif 34)

A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
Reverse Opposite:
G A C T G A T C T C A G C T A G C T G A T G C A T A C G A C T G C T A G T G C A
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.721
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif82.0
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets46.9 +/- 26.2bp
Average Position of motif in Background46.9 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTYCCRA
NCTTCCCGCCC--
 A C G T A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TCCCTYCCRA---
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTYCCRA
TTTCCCGCCMAV
 A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTYCCRA
GGTCCCGCCC--
 A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTYCCRA
NNTTCCCGCCC--
 A C G T A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTYCCRA
NYTTCCCGCC---
 A C G T A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCCCTYCCRA--
CTATCCCCGCCCTATT
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A A C G T A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTYCCRA
TTCCCGCCWG-
 A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTYCCRA
GTTTCACTTCCG-
 A C G T A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTYCCRA
KGCCCTTCCCCA
 A C G T A C G T A C G T A G T C G T A C A T G C A C G T G A C T A G T C A G T C C T A G C T G A
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A