Information for 20-CATGCAAGCC (Motif 33)

A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C
Reverse Opposite:
A C T G A C T G A G T C G A C T A C G T C T A G G T A C G T C A C A G T A C T G
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.842
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets51.5 +/- 26.3bp
Average Position of motif in Background59.4 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATGCAAGCC-
AGATGCAATCCC
 A C G T A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATGCAAGCC
TBGCACGCAA---
 A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATGCAAGCC-
AAGGCAAGTGT
 A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATGCAAGCC----
ACTATGCCAACCTACC
 A C G T A C G T A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATGCAAGCC--
TCCCAGMCRAGCCCC
 A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CATGCAAGCC
SCAGYCADGCATGAC
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CATGCAAGCC---
ACATTCATGACACG
 A C G T A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CATGCAAGCC
-ATGCCAACC
 A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CATGCAAGCC
MTGATGCAAT--
 A C G T A C G T A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATGCAAGCC
CACGCA----
 A G T C G C T A A C G T A C T G A G T C C G T A C G T A A C T G T A G C G T A C
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T