Information for 12-KCAAAAGAGG (Motif 20)

A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G
Reverse Opposite:
T G A C A G T C A C G T A G T C C G A T A C G T A C G T C G A T A C T G T G C A
p-value:1e-10
log p-value:-2.476e+01
Information Content per bp:1.824
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets55.4 +/- 25.6bp
Average Position of motif in Background36.5 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:KCAAAAGAGG-----
-AAAAAGCGGAAGTA
 A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:KCAAAAGAGG-----
-AAAAAGAGGAAGTA
 A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KCAAAAGAGG----
GCAAAACATTACTA
 A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G A C G T A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---KCAAAAGAGG
ACATCAAAGG---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---KCAAAAGAGG
ACWTCAAAGG---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-KCAAAAGAGG
RACAAWGG---
 A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---KCAAAAGAGG
AAAACAAAGG---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---KCAAAAGAGG
WATGCAAATGAG-
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------KCAAAAGAGG-
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------KCAAAAGAGG-
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G T G C A A C T G A C T G A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A