Information for 5-CGAAATGGCT (Motif 10)

T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T
Reverse Opposite:
T G C A C A T G T A G C A G T C T C G A A G C T G A C T G A C T A G T C A T C G
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.662
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.59%
Number of Background Sequences with motif117.9
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets52.3 +/- 26.3bp
Average Position of motif in Background51.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGAAATGGCT--
CAAGATGGCGGC
 T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGAAATGGCT-----
AGAAATGACTTCCCT
 T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGAAATGGCT---
--TAATGGCGGNC
 T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGAAATGGCT--
CAAGATGGCGGC
 T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGAAATGGCT
GTTAATGGCC
 T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGAAATGGCT
AACAGATGGC-
 A C G T T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGAAATGGCT
NNATAAGGNN
 T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGAAATGGCT---
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGAAATGGCT
ACCATATGGC-
 A C G T T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGAAATGGCT--
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T T A G C T C A G C T G A C T G A T C G A A G C T T A C G A T C G G T A C A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A