Information for 2-GTGCAGMCRCAGTGCA (Motif 7)

A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A
Reverse Opposite:
A G C T C T A G A G T C C G T A A T G C C G A T A C T G A G C T C T A G A C G T A G T C C A G T T C A G A G T C G T C A G T A C
p-value:1e-12
log p-value:-2.867e+01
Information Content per bp:1.682
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif77.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets51.9 +/- 23.0bp
Average Position of motif in Background53.6 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTGCAGMCRCAGTGCA-----
----AATCGCACTGCATTCCG
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTGCAGMCRCAGTGCA-
---CCGCCCAAGGGCAG
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A A C G T
A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

ZNF143/MA0088.2/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GTGCAGMCRCAGTGCA---
---TACCCACAATGCATTG
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GTGCAGMCRCAGTGCA
------WDNCTGGGCA
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GTGCAGMCRCAGTGCA-----
------CCACACAGCAGGAGA
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GTGCAGMCRCAGTGCA
-TGCTGACTCA-----
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GTGCAGMCRCAGTGCA-------
------CAGATGTGCACATACGT
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GTGCAGMCRCAGTGCA
--CCAGACRSVB----
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GTGCAGMCRCAGTGCA-
-----GCCTCAGGGCAT
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GTGCAGMCRCAGTGCA
--BCAGACWA------
 A C T G C A G T C T A G A G T C G C T A T A C G G T C A A G T C T C G A G T A C C G T A A T C G G C A T A C T G A G T C C T G A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T