Information for 9-TGAAGTCTGC (Motif 22)

A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C G T A T G C C G T A
p-value:1e-7
log p-value:-1.668e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.8 +/- 17.7bp
Average Position of motif in Background61.9 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGAAGTCTGC
VBSYGTCTGG
 A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGAAGTCTGC
--TWGTCTGV
 A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGAAGTCTGC
--CTGTCTGG
 A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAAGTCTGC
TGACGTCA--
 A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAAGTCTGC
TGACGT----
 A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C
A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAAGTCTGC-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGAAGTCTGC-
ATGACGTCATCN
 A C G T A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGTCTGC-
GTGACGTCACCG
 A C G T A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGAAGTCTGC-
ATGACGTCATCN
 A C G T A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C A C G T
T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

PB0004.1_Atf1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGAAGTCTGC--
ACGATGACGTCATCGA
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G T C A A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A