Information for 6-TGCAGCCCCGCCTTCG (Motif 19)

A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G
Reverse Opposite:
A T G C A C T G C G T A G T C A A C T G A C T G A G T C A T C G A C T G C T A G A C T G A G T C C G A T A C T G A G T C C T G A
p-value:1e-8
log p-value:-1.908e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.5 +/- 12.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGCAGCCCCGCCTTCG
--NAGCCCCGCCCCCN
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGCAGCCCCGCCTTCG---
----GCCCCGCCCCCTCCC
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGCAGCCCCGCCTTCG
---GGCCCCGCCCCC-
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGCAGCCCCGCCTTCG
----GCTCCGCCCMCY
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGCAGCCCCGCCTTCG
----GCCCCGCCCCC-
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCAGCCCCGCCTTCG--
-TACGCCCCGCCACTCTG
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGCAGCCCCGCCTTCG
-NNGGCCACGCCTTTN
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G
A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGCAGCCCCGCCTTCG-
--NRGCCCCRCCCHBNN
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGCAGCCCCGCCTTCG
----GCCCCGCCCC--
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGCAGCCCCGCCTTCG
----GCCMCRCCCH--
 A G C T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C G T A G T C A T C G
A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T