Information for 5-YCTCTTMCWGRCWGRG (Motif 13)

G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
Reverse Opposite:
T A G C G A C T T G A C G C T A C T A G A G C T G A T C G C A T T C A G C A G T G T C A T G C A A T C G C G T A C T A G C T G A
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.577
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif352.9
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets50.1 +/- 24.5bp
Average Position of motif in Background50.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.50
Offset:8
Orientation:forward strand
Alignment:YCTCTTMCWGRCWGRG--
--------WDNCTGGGCA
 G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:YCTCTTMCWGRCWGRG
---NTGATTGACAGN-
 G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-YCTCTTMCWGRCWGRG
TKCTGTTCCA-------
 A C G T G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:YCTCTTMCWGRCWGRG
---BTGABTGACAGS-
 G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:YCTCTTMCWGRCWGRG
-CTGTTCCTGG-----
 G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---YCTCTTMCWGRCWGRG
GTTTCACTTCCG-------
 A C G T A C G T A C G T G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:YCTCTTMCWGRCWGRG---
----TCNCCTGCTGNGNNN
 G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-YCTCTTMCWGRCWGRG
ACCACTTAA--------
 A C G T G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----YCTCTTMCWGRCWGRG
CTTATCTGTGAGGAGCAG--
 A C G T A C G T A C G T A C G T G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
T G A C G A C T C G A T C G T A A C G T A G T C G C A T A T C G A C G T T C A G G T C A T A C G T C A G G C T A T C A G T G A C C G T A A T C G A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:YCTCTTMCWGRCWGRG
-CTATTTTTGG-----
 G A C T A G T C G C A T T A G C A C G T A C G T G T C A A G T C C G T A C T A G T C G A G A T C C G A T A C T G C T G A A C T G
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T A C G T A C G T