Information for 6-AGATGTKAWATGCAAG (Motif 9)

C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G
Reverse Opposite:
G A T C G C A T A C G T A C T G G T A C G T C A G A C T C G T A C G A T T G C A C T G A G T A C C G T A G A C T A T G C A C G T
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.656
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets46.9 +/- 28.0bp
Average Position of motif in Background42.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:AGATGTKAWATGCAAG-
-------ATATGCAAAT
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:AGATGTKAWATGCAAG----
-------ATATGCAAATNNN
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AGATGTKAWATGCAAG-
-------TTATGCAAAT
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGATGTKAWATGCAAG
WYATGCATWATGCAT-
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGATGTKAWATGCAAG-
--ATGAATWATTCATGA
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G A C G T
A C G T A C G T G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGATGTKAWATGCAAG----
---TNNATTATGCATANNTT
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGATGTKAWATGCAAG
-----GHATATKCAT-
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGATGTKAWATGCAAG
AGGTGTGAAA------
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGATGTKAWATGCAAG-----
-----TTGTATGCAAATTAGA
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGATGTKAWATGCAAG-----
-----TTGTATGCAAATTAGA
 C G T A T A C G C G T A C G A T A C T G A G C T A C G T G C T A G C A T C T G A A C G T A C T G T G A C G T C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A