Information for 5-AGAGGTGAGCCCA (Motif 4)

C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G T A C G T A G C C G A T T G A C C T G A A G T C A G T C A C G T A T G C A G C T
p-value:1e-14
log p-value:-3.406e+01
Information Content per bp:1.776
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif38.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.0 +/- 24.8bp
Average Position of motif in Background45.7 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGAGGTGAGCCCA-
CAAAGGCGTGGCCAG
 A C G T C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGAGGTGAGCCCA-
GCGGAGGTGTCGCCTC
 A C G T A C G T C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAGGTGAGCCCA
-CAGGTGAGG---
 C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAGGTGAGCCCA
AGRGGTCA-----
 C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAGGTGAGCCCA
-CAGGTAAGTAT-
 C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGGTGAGCCCA
TRAGGTCA-----
 C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAGGTGAGCCCA-----
--GGGTGTGCCCAAAAGG
 C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGGTGAGCCCA
GGGGGTGTGTCC-
 C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGGTGAGCCCA
MKGGGYGTGGCC-
 C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGAGGTGAGCCCA
CAAAGGTCAG----
 A C G T C T G A A T C G C G T A A C T G A C T G A G C T A C T G C G T A A C T G A T G C A G T C A G T C C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T