Information for 14-RMTTATRCTTYTC (Motif 20)

C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C
Reverse Opposite:
A C T G C G T A C T G A C G T A C G T A A C T G A G T C C G T A A C G T C G T A C G T A A C G T A G C T
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets29.7 +/- 18.2bp
Average Position of motif in Background43.1 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0064.1_Sox14_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---RMTTATRCTTYTC
NNTAATTATAATTNNN
 A C G T A C G T A C G T C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---RMTTATRCTTYTC
TATAATTATAATATTC
 A C G T A C G T A C G T C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RMTTATRCTTYTC
GAATATTCAT---
 C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--RMTTATRCTTYTC--
TNNATTATGCATANNTT
 A C G T A C G T C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RMTTATRCTTYTC
AAGATATCCTT---
 A C G T C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RMTTATRCTTYTC------
--NNANTCTTATCTNNNNN
 C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RMTTATRCTTYTC
TACTTCCGCTTTTT
 A C G T C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RMTTATRCTTYTC
TGAATTATGCAT---
 A C G T A C G T C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RMTTATRCTTYTC
GHATATKCAT---
 C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:RMTTATRCTTYTC------
--NTNTTCTTATCAGTNTN
 C T G A G T C A C G A T C G A T G T C A A C G T C T A G A G T C A C G T A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A